Recent publications from Edinburgh Infectious Diseases

A selection of recent publications from members of Edinburgh Infectious Diseases

In each of the past four years (2011-15), Edinburgh Infectious Diseases members have published more than 400 papers each year.

For this month's hot-off-the-press publications please see below

Wordle of the month - taken from the publication titles !

New notifications from PubMed - December 2017 

  1. Araújo D1, Shteinberg M2, Aliberti S3,4, Goeminne PC5,6, Hill AT7, Fardon T8, Obradovic D et al. Standardised classification of the aetiology of bronchiectasis using an objective algorithm. Eur Respir J. 2017 Dec 14;50(6). pii: 1701289. doi: 10.1183/13993003.01289-2017. Print 2017 Dec. https://www.ncbi.nlm.nih.gov/pubmed/29242262
  2. Armstrong GM1, Maybin JA1, Murray AA1, Nicol M1, Walker C1, Saunders PTK2, Rossi AG2, Critchley HOD3. Endometrial apoptosis and neutrophil infiltration during menstruation exhibits spatial and temporal dynamics that are recapitulated in a mouse model. Sci Rep. 2017 Dec 12;7(1):17416. doi: 10.1038/s41598-017-17565-x. https://www.ncbi.nlm.nih.gov/pubmed/29234102
  3. Auffret MD1, Dewhurst RJ2, Duthie CA2, Rooke JA2, John Wallace R3, Freeman TC4, et al. Microbiome. 2017 Dec 11;5(1):159. doi: 10.1186/s40168-017-0378-z. https://www.ncbi.nlm.nih.gov/pubmed/29228991
  4. Barth ND1, Marwick JA1, Vendrell M1, Rossi AG1, Dransfield I1. The "Phagocytic Synapse" and Clearance of Apoptotic Cells. Front Immunol. 2017 Dec 4;8:1708. doi: 10.3389/fimmu.2017.01708. eCollection 2017. https://www.ncbi.nlm.nih.gov/pubmed/29255465
  5. Campana L1,2, Starkey Lewis PJ2, Pellicoro A3, Aucott RL3, Man J2, O'Duibhir E2, Mok SE4, et al. The STAT3-IL-10-IL-6 Pathway Is a Novel Regulator of Macrophage Efferocytosis and Phenotypic Conversion in Sterile Liver Injury. J Immunol. 2017 Dec 20. pii: ji1701247. doi: 10.4049/jimmunol.1701247. [Epub ahead of print] https://www.ncbi.nlm.nih.gov/pubmed/29263216
  6. Corripio-Miyar Y1, Mellanby RJ2, Morrison K1, McNeilly TN3. 1,25-Dihydroxyvitamin D3 modulates the phenotype and function of Monocyte derived dendritic cells in cattle. BMC Vet Res. 2017 Dec 13;13(1):390. doi: 10.1186/s12917-017-1309-8. https://www.ncbi.nlm.nih.gov/pubmed/29237505
  7. Douglas F1, Sargison ND1. Husbandry procedures at the point of lambing with reference to perinatal lamb mortality. Vet Rec. 2017 Dec 14. pii: vetrec-2017-104520. doi: 10.1136/vr.104520. [Epub ahead of print] https://www.ncbi.nlm.nih.gov/pubmed/29242312
  8. Doyle SR1, Laing R2, Bartley DJ3, Britton C2, Chaudhry U4, Gilleard JS5, Holroyd N1, Mable BK2 et al. A genome resequencing-based genetic map reveals the recombination landscape of an outbred parasitic nematode in the presence of polyploidy and polyandry. Genome Biol Evol. 2017 Dec 18. doi: 10.1093/gbe/evx269. [Epub ahead of print] https://www.ncbi.nlm.nih.gov/pubmed/29267942
  9. Farro G1, Stakenborg M1, Gomez-Pinilla PJ1, Labeeuw E1, Goverse G1, Giovangiulio MD1, et al. CCR2-dependent monocyte-derived macrophages resolve inflammation and restore gut motility in postoperative ileus. Gut. 2017 Dec;66(12):2098-2109. doi: 10.1136/gutjnl-2016-313144. Epub 2017 Jun 14. https://www.ncbi.nlm.nih.gov/pubmed/28615302
  10. Gual I1, Bartley PM2, Katzer F2, Innes EA2, Cantón GJ3, Moore DP4. Molecular confirmation of Sarcocystis gigantea in a naturally infected sheep in Argentina: A case report. Vet Parasitol. 2017 Dec 15;248:25-27. doi: 10.1016/j.vetpar.2017.10.017. Epub 2017 Nov 6. https://www.ncbi.nlm.nih.gov/pubmed/29173536
  11. Horton B1, Katzer F2, Desmulliez MPY3, Bridle HL4. Towards enhanced automated elution systems for waterborne protozoa using megasonic energy. J Microbiol Methods. 2017 Dec 12;145:28-36. doi: 10.1016/j.mimet.2017.12.002. [Epub ahead of print] https://www.ncbi.nlm.nih.gov/pubmed/29246779
  12. Hume DA1,2, Wollscheid-Lengeling E3, Rojo R3, Pridans C3. The evolution of the macrophage-specific enhancer (Fms intronic regulatory element) within the CSF1R locus of vertebrates. Sci Rep. 2017 Dec 7;7(1):17115. doi: 10.1038/s41598-017-15999-x. https://www.ncbi.nlm.nih.gov/pubmed/29215000
  13. Jensen K1, Gallagher IJ2, Johnston N3, Welsh M3,4, Skuce R3,4, Williams JL5, Glass EJ2. Variation in the early host-pathogen interaction of bovine macrophages with divergent UK Mycobacterium bovis strains. Infect Immun. 2017 Dec 20. pii: IAI.00385-17. doi: 10.1128/IAI.00385-17. [Epub ahead of print] https://www.ncbi.nlm.nih.gov/pubmed/29263113
  14. Johannessen I1, Danial J2, Smith DB3, Richards J2, Imrie L4, Rankin A4, Willocks LJ5, et al. Molecular and Epidemiological Evidence of Patient-to-Patient Hepatitis C virus Transmission in a Scottish Emergency Department. J Hosp Infect. 2017 Dec 11. pii: S0195-6701(17)30677-1. doi: 10.1016/j.jhin.2017.12.006. [Epub ahead of print] https://www.ncbi.nlm.nih.gov/pubmed/29242141
  15. Johnston HJ1, Verdon R1, Gillies S1, Brown DM1, Fernandes TF1, Henry TB1, Rossi AG2, Tran L3, Tucker C2, Tyler CR4, Stone V1. Adoption of in vitro systems and zebrafish embryos as alternative models for reducing rodent use in assessments of immunological and oxidative stress responses to nanomaterials. Crit Rev Toxicol. 2017 Dec 14:1-20. doi: 10.1080/10408444.2017.1404965. [Epub ahead of print] https://www.ncbi.nlm.nih.gov/pubmed/29239234
  16. Jubb AW1, Boyle S2, Hume DA3, Bickmore WA4. Glucocorticoid Receptor Binding Induces Rapid and Prolonged Large-Scale Chromatin Decompaction at Multiple Target Loci. Cell Rep. 2017 Dec 12;21(11):3022-3031. doi: 10.1016/j.celrep.2017.11.053. https://www.ncbi.nlm.nih.gov/pubmed/29241532
  17. Kast JI1,2, McFarlane AJ3, Głobińska A1,2,4, Sokolowska M1,2, Wawrzyniak P1,2, Sanak M5, Schwarze J3,6, Akdis CA1,2, Wanke K1,2. Respiratory syncytial virus infection influences tight junction integrity. Clin Exp Immunol. 2017 Dec;190(3):351-359. doi: 10.1111/cei.13042. Epub 2017 Oct 5. https://www.ncbi.nlm.nih.gov/pubmed/28856667
  18. Krejciova Z1,2, Alibhai J1, Zhao C3, Krencik R4, Rzechorzek NM3,5, Ullian EM6, Manson J7, et al. Human stem cell-derived astrocytes replicate human prions in a PRNP genotype-dependent manner. J Exp Med. 2017 Dec 4;214(12):3481-3495. doi: 10.1084/jem.20161547. Epub 2017 Nov 15. https://www.ncbi.nlm.nih.gov/pubmed/29141869
  19. Lee AM1, Wolfe A1, Cassidy JP1, McV Messam LL1, Moriarty JP2, O'Neill R2, Fahy C2, et al. First confirmation by PCR of Jaagsiekte sheep retrovirus in Ireland and prevalence of ovine pulmonary adenocarcinoma in adult sheep at slaughter. Ir Vet J. 2017 Dec 19;70:33. doi: 10.1186/s13620-017-0111-z. eCollection 2017. https://www.ncbi.nlm.nih.gov/pubmed/29270288
  20. Partridge FA1, Brown AE1, Buckingham SD1, Willis NJ2, Wynne GM2, Forman R3, Else KJ3, et al. An automated high-throughput system for phenotypic screening of chemical libraries on C. elegans and parasitic nematodes. Int J Parasitol Drugs Drug Resist. 2017 Dec 2;8(1):8-21. doi: 10.1016/j.ijpddr.2017.11.004. [Epub ahead of print] https://www.ncbi.nlm.nih.gov/pubmed/29223747
  21. Peachey LE1, Pinchbeck GL2, Matthews JB3, Burden FA4, Lespine A5, von Samson-Himmelstjerna G6, Krücken J6, Hodgkinson JE2. P-glycoproteins play a role in ivermectin resistance in cyathostomins. Int J Parasitol Drugs Drug Resist. 2017 Dec;7(3):388-398. doi: 10.1016/j.ijpddr.2017.10.006. Epub 2017 Oct 25. https://www.ncbi.nlm.nih.gov/pubmed/29121562
  22. Serrels B1, McGivern N2, Canel M3, Byron A2, Johnson SC4, McSorley HJ3, Quinn N2, et al. IL-33 and ST2 mediate FAK-dependent antitumor immune evasion through transcriptional networks. Sci Signal. 2017 Dec 5;10(508). pii: eaan8355. doi: 10.1126/scisignal.aan8355. https://www.ncbi.nlm.nih.gov/pubmed/29208683
  23. Swann OV1, Harrison EM2, Opi DH1,3,4, Nyatichi E3, Macharia A3, Uyoga S3, Williams TN3,5, Rowe JA6. No Evidence that Knops Blood Group Polymorphisms Affect Complement Receptor 1 Clustering on Erythrocytes. Sci Rep. 2017 Dec 19;7(1):17825. doi: 10.1038/s41598-017-17664-9. https://www.ncbi.nlm.nih.gov/pubmed/29259218
  24. Tahoun A1,2, Jensen K1, Corripio-Miyar Y1,3, McAteer S1, Smith DGE3,4,5, McNeilly TN3, Gally DL1, Glass EJ6. Host species adaptation of TLR5 signalling and flagellin recognition. Sci Rep. 2017 Dec 15;7(1):17677. doi: 10.1038/s41598-017-17935-5. https://www.ncbi.nlm.nih.gov/pubmed/29247203
  25. Tian D1, Sooryanarain H1, Matzinger SR1, Gauger PC2, Karuppannan AK2, Elankumaran S1, Opriessnig T3, Meng XJ1. Protective efficacy of a virus-vectored multi-component vaccine against porcine reproductive and respiratory syndrome virus, porcine circovirus type 2 and swine influenza virus. J Gen Virol. 2017 Dec;98(12):3026-3036. doi: 10.1099/jgv.0.000964. Epub 2017 Nov 1. https://www.ncbi.nlm.nih.gov/pubmed/29091579
  26. van Boeckel SR1, Davidson DJ2, Norman JE3, Stock SJ4. Cell-free Fetal DNA and Spontaneous Preterm Birth. Reproduction. 2017 Dec 21. pii: REP-17-0619. doi: 10.1530/REP-17-0619. [Epub ahead of print]https://www.ncbi.nlm.nih.gov/pubmed/29269517
  27. Zhong W1,2, Cui L1, Goh BC1,2, Cai Q3, Ho P1, Chionh YH1,4, Yuan M5,6, Sahili AE2,7, et al. Allosteric pyruvate kinase-based "logic gate" synergistically senses energy and sugar levels in Mycobacterium tuberculosis. Nat Commun. 2017 Dec 7;8(1):1986. doi: 10.1038/s41467-017-02086-y. https://www.ncbi.nlm.nih.gov/pubmed/29215013
  28. Zíková A1,2, Verner Z1,3, Nenarokova A1,2, Michels PAM4, Lukeš J1,2. A paradigm shift: The mitoproteomes of procyclic and bloodstream Trypanosoma brucei are comparably complex. PLoS Pathog. 2017 Dec 21;13(12):e1006679. doi: 10.1371/journal.ppat.1006679. eCollection 2017 Dec. https://www.ncbi.nlm.nih.gov/pubmed/29267392

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